Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs13153032 chr5:6576580 C/G 5.74E-14 289 26 26.83 12.93 KM Plot
KIRP rs13160776 chr5:180665933 A/T 7.33E-15 289 3.73 27.5 25.67 KM Plot
KIRP rs13176715 chr5:178178110 G/A 1.12E-5 283 26.4 21.97 10.83 KM Plot
KIRP rs13177748 chr5:176643954 T/G 2.34E-8 287 25.78 25.7 4.93 KM Plot
KIRP rs13190888 chr6:28285985 G/A 0 289 25.6 26.58 9.38 KM Plot
KIRP rs13191038 chr6:28482917 T/C 2.3E-8 283 25.58 28.02 9.77 KM Plot
KIRP rs13191227 chr6:27390115 G/C 1.55E-8 289 25.5 28.57 9.77 KM Plot
KIRP rs13191786 chr6:28277671 T/G 1.54E-8 288 25.6 27.78 9.77 KM Plot
KIRP rs13192965 chr6:27671825 G/A 1.21E-8 288 25.58 29.2 9.77 KM Plot
KIRP rs13193295 chr6:28003228 C/G 2.5E-8 285 25.6 26.4 9.77 KM Plot
KIRP rs13193480 chr6:27702561 A/G 1.21E-8 289 25.58 28.68 9.77 KM Plot
KIRP rs13193542 chr6:27702425 G/T 1.21E-8 289 25.58 28.68 9.77 KM Plot
KIRP rs13194504 chr6:28630691 G/A 2.46E-8 282 25.57 28.02 9.77 KM Plot
KIRP rs13194781 chr6:27815639 A/G 1.23E-8 289 25.62 27.78 9.77 KM Plot
KIRP rs13195291 chr6:28169241 G/A 1.58E-8 287 25.58 29.43 9.77 KM Plot